upset.hp: An R Package for Visualizing Hierarchical Partitioning and Variance Partitioning Results Using UpSet Plots
Bangken Ying, Yao Liu, Jiangshan Lai · Data Intelligence · 2025
Traditional Venn diagrams become increasingly complex and difficult to interpret when visualizing the intersections of more than four variables or variable groups. The UpSet plot, a matrix-based, data-driven visualization technique, offers a scalable and more readable alternative for representing complex set intersections. The upset.hp R package, newly released in 2025, extends the capabilities of the previously developed UpSetVP package by providing a unified visualization tool compatible with the full suite of hp-series packages developed for hierarchical and variation partitioning, including rdacca.hp, glmm.hp, gam.hp, and phylolm.hp.