Semantic-driven synthesis of histological images with controllable cellular distributions

Alen Shahini, Alessandro Gambella, Filippo Molinari, Massimo Salvi · Computer Methods and Programs in Biomedicine · 2025

• Statistical modelling of nuclear features to generate diverse semantic content. • Introduction of a hybrid architecture to generate realistic histological images. • Control of cellular properties, including type, number and spatial distribution. • Improved overall segmentation performance and enhanced detection of rare cell types. • Generated images match real samples quality and keep expert-verified plausibility. Digital pathology relies heavily on large, well-annotated datasets for training computational methods, but generating such datasets remains challenging due to the expertise required and inter-operator variability. We present SENSE (SEmantic Nuclear Synthesis Emulator), a novel framework for synthesizing realistic histological images with precise control over cellular distributions. Our approach introduces three key innovations: (1) A statistical modeling system that captures class-specific nuclear characteristics from expert annotations, enabling generation of diverse yet biologically plausible semantic content; (2) A hybrid ViT-Pix2Pix GAN architecture that effectively translates semantic maps into high-fidelity histological images; and (3) A modular design allowing independent control of cellular properties including type, count, and spatial distribution. Evaluation on the MoNuSAC dataset demonstrates that SENSE generates images matching the quality of real samples (MANIQA: 0.52 ± 0.03 vs 0.52 ± 0.04) while maintaining expert-verified biological plausibility. In segmentation tasks, augmenting training data with SENSE-generated images improved overall performance (DSC from 79.71 to 84.86) and dramatically enhanced detection of rare cell types, with neutrophil segmentation accuracy increasing from 40.18 to 78.71 DSC. This framework enables targeted dataset enhancement for computational pathology applications while offering new possibilities for educational and training scenarios requiring controlled tissue presentations.

Read the paper · More papers on PaperTik