Analysis code
William E. Draper · Harvard Dataverse · 2016
Python and C++ code for analysis of image data, including: A contour finding algorithm written in C++ and made accessible in Python using Ctypes. Compile the C++ code by running the "compile_contours" shell script, and access the library in python using "find_contours.py". A curvature measuring algorithm, for measuring the curvature of the raw contour data, "curvature_algorithm.py". A peak fitting algorithm for measuring the intensity of fluorescent receptor clusters, "fit_peak.py". The Python code depends on both Numpy and Scipy. Compilation of the contour algorithm requires g++.