Additional file 1 of Sparse coding of pathology slides compared to transfer learning with deep neural networks
Will Fischer, Sanketh S. Moudgalya, Judith D. Cohn, Nga T. T. Nguyen, Garrett T. Kenyon · Figshare · 2018
Tab-delimited file 1. tcga_hist_file_name (original name of image file as downloaded from Genomic Data Commons) 2. tcga_project_code 3. tumor_type (TCGA project tumor type) 4. iocd_topo_code (IOCD topographical code for tumor sample)* 5. iocd_morph_code (IOCD morphological code for tumor sample)* 6. patient_id (TCGA patient ID) 7. sample_id (TCGA sample ID) 8. sample_type (Primary Tumor, Solid Tissue Normal, or Metastatic) * normal samples are taken from the vicinity of tumor samples and are labelled with the same IOCD codes. (TXT 294 kb)