Datasets_for_analyzing_Tara_V9_amplicon_datasets
Joshua Kling · Figshare · 2020
Data used for looking for my Chaetoceros isolate in the tara datasets. The scrips used to analyze these data are found in:Scripts_for_analyzing_Tara_V9_amplicon_datasets "TARA_stations_coords.txt" - Lat and Long for each station sampled as part of the Tara oceans project."formatted_Polarsample_sheet.txt" - Tara polar sample data including all NCBI accessions."Global_ASV.fa" - Representative sequences for ASVs recovered from the Tara Global dataset (as analyzed in Callahan et al., 2017) Citations:Callahan BJ, McMurdie PJ, Holmes SP. Exact sequence variants should replace operational taxonomic units in marker-gene data analysis. The ISME journal. 2017 Dec;11(12):2639-43.