AdaptSearch - toy dataset - Trinity 4 samples
Mataigne Victor, Gildas Le Corguillé, Fontanillas Eric, Baffard Julie, Brun Pierre-Guillaume, Monsoor Misharl, Hourdez Stéphane, Erwan Corre, Jollivet Didier · Figshare · 2019
AdaptSearch is dedicated to the search of selection within branches and sites of phylogenetic trees built from groups of orthologous genes. The first tools proceeds to data filtering and building of genes groups, while the second part proceeds to phylogeny building (using RAxML) and selection detection (codeML). This dataset can be used as toy example to test the pipeline