Intronic sequences
Jonathan B Weitzman · Genome biology · 2001
Sci USA 2001, 98:11193-11198). They chose transcripts from five eukaryote genomes (Saccharomyces cerevisiae, Carnorhabditis elegans, Drosophila melanogaster, Arabidopsis thaliana, and human) whose exon-intron structures were well-defined.They analysed 5' and 3' splice signal motifs in short introns and used mathematical methods (Markov models and Monte Carlo simulations) to determine the amount of information required for intron recognition.While 5' and 3' splice signal sequences were sufficient to predict short introns in the fly and worm genomes (>90% accuracy), human and plant introns required additional transcript features, such as specific pentamer sequences within the intron.