Accurate classification of SARS-CoV-2 clades using Frequency Chaos Game Representation
Jorge Avila Cartes, Santosh Kumar Anand, Simone Ciccolella, Paola Bonizzoni, Gianluca Della Vedova · Zenodo (CERN European Organization for Nuclear Research) · 2022
Results and trained models that are reported in the paper for different k-mers (k=6,7,8,9). It contains: - list of train, validation and test sets used for the experiments - plots for accuracy, validation and confusion matrices. - saliency maps and shap values for each centroid and list of relevant k-mers for each clade base on both methods. - best weights for each trained model