kaczmarj/neurodocker: Version 0.4.2

Jakub Roman Kaczmarzyk, Mathias Goncalves, Steffen Bollmann, Michael Notter, Yaroslav O. Halchenko, Mitchell, Ross, Matthew Cieslak, Dylan M. Nielson, Dorota Jarecka, sulantha2006, schahid, jona-sassenhagen, Satrajit Ghosh, Ingo Marquardt, Giovanni Torres, Christopher Johnson Markiewicz, Arno Klein, Ariel Rokem · Zenodo (CERN European Organization for Nuclear Research) · 2018

Additions Ability to output JSON representation of the neurodocker specification exclude_paths option in FSL to exclude specific paths from tarball extraction Python 3.7 support Fixes Install shared libraries required for matlab compiler runtime 2010a Add back in nlopt dependency in afni PATH variable in afni Enhancements Allows use of miniconda base environment (--miniconda use_env=base ... Adds ANTs versions 2.3.1 and 2.3.1, statically compiled on CentOS 6 Adds matlab compiler runtime 2018b Misc. improvements to the reprozip trace wrapper shell script Installs desktop manager when installing VNC Raises more specific error on dockerfile / singularity recipe generation

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