rCASC implementation in Laniakea: porting containerization-based-reproducibility to a cloud Galaxy on-demand platform
Luca Alessandrì, Pietro Mandreoli, Marco Antonio Tangaro, Marco Beccuti, Raffaele Calogero, Federico Zambelli · 2019
Integrating rCASC in Laniakea: rCASC, Cluster Analysis of Single Cells [Alessandri et al . BioRxiv], is part of the reproducible-bioinformatics.org project and provides single cell analysis functionalities within the reproducible rules described by Sandve et al . [PLoS Comp Biol. 2013]. Laniakea [Tangaro et al . BioRxiv Bioinformatics] provides the possibility to automate the creation of Galaxy-based virtualized environments through an easy setup procedure, providing an on-demand workspace ready to be used by life scientists and bioinformaticians. The final goal is to offer rCASC as a Galaxy flavor in the Laniakea Galaxy on-demand environment.