A BiLSTM-CRF Method to Chinese Electronic Medical Record Named Entity Recognition

Bin Ji, Rui Liu, Shasha Li, Jintao Tang, Jie Yu, Qian Li, WeiSang Xu · 2018

With the application of electronic medical records in medical field, more and more people are paying attention to how to use these data efficiently. In this paper, the BiLSTM-CRF model is applied to Chinese electronic medical records to recognize related named entities in these records. For the characteristics of Chinese electronic medical records, firstly, the one-hot vector of each word is obtained in units of sentences. Secondly, map one-hot vector to a low-dimensional dense word vector. Thirdly, word vector is used as the input of the BiLSTM layer to achieve automatic extraction of sentence features. Finally, the CRF layer performs sequence-level labeling of sentences. In addition, drug dictionary and post-correction rules are added to correct the segmentation error of entity boundary, to improve recognition accuracy of related named entities. The F1 value of this method on a given test data set is 87.68%.

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