Parallel I/O Optimizations for Scalable Deep Learning
Sarunya Pumma, Min Si, Wu-chun Feng, Pavan Balaji · 2017
As deep learning systems continue to grow in importance, researchers have been analyzing approaches to make such systems efficient and scalable on high-performance computing platforms. As computational parallelism increases, however, data I/O becomes the major bottleneck limiting the overall system scalability. In this paper, we continue our efforts to improve LMDB, the I/O subsystem of the Caffe deep learning framework. In a previous paper we presented LMDBIO---an optimized I/O plugin for Caffe that takes into account the data access pattern of Caffe in order to vastly improve I/O performance. Nevertheless, LMDBIO's optimizations, which we henceforth call LMM (localized mmap), are limited to intranode performance, and these optimizations do little to minimize the I/O inefficiencies in distributed-memory environments. In this paper, we propose LMDBIO-DM, an enhanced version of LMDBIO-LMM that optimizes the I/O access of Caffe in distributed-memory environments. We present several sophisticated data I/O techniques that allow for significant improvement in such environments. Our experimental results show that LMDBIO-DM can improve the overall execution time of Caffe by more than 30-fold compared with LMDB and by 2-fold compared with LMDBIO-LMM.