Hierarchical clustering results of all 36 024 comparable pairs of probes
Barnes Michael, Freudenberg Johannes, Thompson Susan, Aronow Bruce, Paul Pavlidis · Figshare · 2011
Copyright information:Taken from "Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms"Nucleic Acids Research 2005;33(18):5914-5923.Published online 19 Oct 2005PMCID:PMC1258170.© The Author 2005. Published by Oxford University Press. All rights reserved The dilution step is shown as a graph at the top of the figure (Blood/Placenta). Black bars at the side indicate large clusters of genes that appear to show clear dilution effects in both platforms. Gray bars indicate examples of clusters that appear to show dilution effects in one platform but not consistently in the other. Lighter colors indicate higher relative levels of expression on an arbitrary scale. Note that in this figure, if a gene occurs multiple times on one platform, it is shown in all possible valid comparisons with matching probes on the other platform.