CHARMM-GUI: A graphical user interface for the CHARMM users
Sunhwan Jo, Vidyashankara G. Iyer, Taehoon Kim, Wonpil Im · Figshare · 2014
The CHARMM-GUI is a graphical user interface for molecular dynamics for biology scientists. Using this interface, a scientists can read and modify PDB from various sources and generates input files solvating in a explicit or implicit solvent and solving PB (Poisson-Boltzman) Equation to compute solvent accessible surface. The interface also provides an easy access to set up the periodic boundary condition and environment for molecular dynamics. The input and output files generated while using the interface are available for downloading.