A Clustal alignment improver using evolutionary algorithms

René Thomsen, Gary B. Fogel, Thiemo Krink · 2003

Multiple sequence alignment (MSA) is a crucial task in bioinformatics. In this paper we extended previous work with evolutionary algorithms (EA) by using MSA solutions obtained from the wellknown Clustal V algorithm as a candidate solution seed of the initial EA population. Our results clearly show that EAs can improve the results of Clustal V significantly with marginal computational effort.

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