XML documentation of biopathways and their simulations in Genomic Object Net.
Hiroshi Matsuno, Atsushi Doi, Yuichi Hirata A, Satoru Miyano · PubMed · 2001
Genomic Object Net is a software tool for modeling and simulating biopathways which employs the notion of hybrid functional net as its basic architechture. This paper shows how to integrate this basic architecture with XML documents for biopathway representations, simulations, and visualizations for creating a tailor-made simulation environment.