A data-based coding of candidate strings in the closest string problem

Bryant A. Julstrom · 2009

Given a set of strings S of equal lengths over an alphabet σ, the closest string problem seeks a string over σ whose maximum Hamming distance to any of the given strings is as small as possible. A data-based coding of strings for evolutionary search represents candidate closest strings as sequences of indexes of the given strings. The string such a chromosome represents consists of the symbols in the corresponding positions of the indexed strings.

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