A web-based three-dimensional protein retrieval system by matching visual similarity
Jung-Jung Yeh, Dian-Yong Chen, Bing‐Yu Chen, Ming Ouhyoung · Computer applications in the biosciences · 2005
Summary: A web-based three-dimensional (3D) protein retrieval system is available for protein structure data including all PDB and FSSP dataset. In this system, we use a visual-based matching method to compare the protein structure from multiple viewpoints. It takes less than three seconds for each query with 90% accuracy on an average. Availability: The web-based query interface and downloadable files can be accessed via http://3d.csie.ntu.edu.tw/ProteinRetrieval/ Contact: [email protected] Supplementary information: Further details of the proposed method are available at http://graphics.csie.ntu.edu.tw/~jsyeh/3Dprotein/