Solving the molecular distance geometry problem with inaccurate distance data

Michael Souza, Carlile Lavor, Albert Einstein Fernandes Muritiba, Nelson Maculan · BMC Bioinformatics · 2013

We present a new iterative algorithm for the molecular distance geometry problem with inaccurate and sparse data, which is based on the solution of linear systems, maximum cliques, and a minimization of nonlinear least-squares function. Computational results with real protein structures are presented in order to validate our approach.

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