Probabilistic subgroup identification using Bayesian finite mixture modelling: A case study in Parkinson's disease phenotype identification
Nicole Marie White, Helen Johnson, Peter A. Silburn, George D. Mellick, Nadeeka N. Dissanayaka, Kerrie Lee Mengersen · Statistical Methods in Medical Research · 2010
This article explores the use of probabilistic classification, namely finite mixture modelling, for identification of complex disease phenotypes, given cross-sectional data. In particular, if focuses on posterior probabilities of subgroup membership, a standard output of finite mixture modelling, and how the quantification of uncertainty in these probabilities can lead to more detailed analyses. Using a Bayesian approach, we describe two practical uses of this uncertainty: (i) as a means of describing a person's membership to a single or multiple latent subgroups and (ii) as a means of describing identified subgroups by patient-centred covariates not included in model estimation. These proposed uses are demonstrated on a case study in Parkinson's disease (PD), where latent subgroups are identified using multiple symptoms from the Unified Parkinson's Disease Rating Scale (UPDRS).